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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2440KEGG: ade:Adeh_3520 heat repeat protein. (360 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.855
Swol_2439
KEGG: ade:Adeh_3521 glycosyl transferase, family 2.
 
     0.839
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
 
   0.794
Swol_0284
KEGG: mba:Mbar_A3063 hypothetical protein.
 
  
 0.789
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
 
     0.784
Swol_1996
cAMP-binding protein; KEGG: ppu:PP3250 transporter, putative.
 
   
 0.781
Swol_0165
FOG: WD40-like repeat protein; KEGG: mac:MA4287 cell surface protein.
 
     0.777
Swol_0945
KEGG: ddi:DDB0204067 hypothetical protein.
  
     0.773
Swol_2063
KEGG: bca:BCE5566 hypothetical protein.
  
     0.773
Swol_2188
Hypothetical protein.
  
     0.773
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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