STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2444KEGG: gme:Gmet_0766 glycosyl transferase, group 1. (345 aa)    
Predicted Functional Partners:
Swol_2445
KEGG: par:Psyc_0661 putative LmbE-like protein.
  
  
 0.804
Swol_1908
Glycosyltransferases involved in cell wall biogenesis-like protein; KEGG: pca:Pcar_1758 putative glycosyl transferase.
  
  
 0.601
Swol_1084
Non-ribosomal peptide synthetase modules and related proteins-like protein; KEGG: bld:BLi00402 lichenysin synthetase B; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 
 0.487
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
  
 
 0.481
Swol_0722
Hypothetical protein; KEGG: pcr:Pcryo_0621 polysaccharide biosynthesis protein.
  
  
 0.472
Swol_2446
KEGG: gme:Gmet_3464 secretion protein HlyD.
  
  
 0.470
Swol_2447
KEGG: bxe:Bxe_A1913 ABC multidrug efflux pump, ATPase subunit.
  
  
 0.464
Swol_2448
KEGG: gme:Gmet_0657 ABC transporter-related protein.
  
  
 0.464
Swol_2449
ABC-type multidrug transport system permease component; KEGG: mta:Moth_1899 ABC-2.
       0.447
Swol_0174
KEGG: sth:STH1184 hypothetical protein, aspartate-rich.
  
  
 0.411
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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