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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2452Carbonic anhydrase-like protein; KEGG: hma:rrnAC0751 carbonic anhydrase. (234 aa)    
Predicted Functional Partners:
Swol_0091
KEGG: tte:TTE0064 Formate/nitrite family of transporters.
  
  
 0.780
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
 
  
 0.512
Swol_2054
KEGG: cpe:CPE1014 probable flavoprotein.
  
  
 0.508
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
   
 0.497
Swol_1726
Hypothetical protein; KEGG: bld:BLi02765 YrhF.
  
    0.495
Swol_0352
KEGG: dde:Dde_2855 sulfate permease (SulP).
 
  
 0.481
Swol_2453
Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
       0.478
Swol_2052
Conserved hypothetical protein; Involved in syntrophic growth of S.wolfei with butyrate, as part of the butyrate oxidation pathway. Catalyzes the oxidation of butanoyl-CoA to crotonyl-CoA. Probably passes the electrons released by this reaction on to electron-transfer flavoproteins (EtfAB) to finally generate hydrogen and/or formate.
      
 0.447
Swol_0767
Phosphotransacetylase; KEGG: ctc:CTC01239 phosphate acetyltransferase.
     
 0.435
Swol_1019
KEGG: chy:CHY_0731 Fe-hydrogenase, gamma subunit.
    
 
 0.431
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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