STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2455KEGG: sat:SYN_00841 hypothetical cytosolic protein. (72 aa)    
Predicted Functional Partners:
Swol_2454
KEGG: sat:SYN_00842 uridylate kinase.
 
     0.939
Swol_1471
KEGG: pca:Pcar_2393 hypothetical protein.
 
     0.775
Swol_2485
KEGG: pca:Pcar_2393 hypothetical protein.
 
     0.775
Swol_2484
KEGG: pca:Pcar_2393 hypothetical protein.
 
     0.744
Swol_1783
KEGG: sat:SYN_00096 hypothetical cytosolic protein.
  
     0.669
Swol_1692
KEGG: mta:Moth_1420 hypothetical protein.
  
     0.649
Swol_1812
Hypothetical protein; KEGG: pfo:Pfl_2556 GCN5-related N-acetyltransferase.
  
     0.582
Swol_1810
Hypothetical protein.
  
     0.561
Swol_1689
KEGG: pca:Pcar_0158 hypothetical protein.
  
     0.480
Swol_1053
Sensor domain-like protein; KEGG: pca:Pcar_0290 signal transduction histidine kinase regulating C4-dicarboxylate transport system-like.
  
     0.467
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.