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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2456KEGG: dsy:DSY3826 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (431 aa)    
Predicted Functional Partners:
Swol_2458
KEGG: dsy:DSY3824 hypothetical protein.
 
  
 0.979
Swol_2457
KEGG: tte:TTE1199 ABC-type transport systems, involved in lipoprotein release, ATPase components.
 
 
 0.949
Swol_0134
Hypothetical protein; KEGG: mta:Moth_2342 outer membrane protein-like.
 
 
 0.860
Swol_1741
Hypothetical protein; KEGG: ana:alr7295 putative multidrug resistance protein.
 
 
 0.722
Swol_2230
KEGG: dsy:DSY0173 hypothetical protein.
  
 
 0.686
Swol_2231
KEGG: dsy:DSY0174 hypothetical protein.
  
 
 0.686
Swol_0943
KEGG: blo:BL1133 protein with weak similarity to components of ABC transporter.
 
   
 0.608
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
 
  
 0.603
hisI
KEGG: chy:CHY_1091 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family.
  
    0.532
Swol_1118
KEGG: dsy:DSY2068 hypothetical protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.487
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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