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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2457KEGG: tte:TTE1199 ABC-type transport systems, involved in lipoprotein release, ATPase components. (244 aa)    
Predicted Functional Partners:
Swol_2458
KEGG: dsy:DSY3824 hypothetical protein.
 
 0.999
Swol_0943
KEGG: blo:BL1133 protein with weak similarity to components of ABC transporter.
 
 0.977
Swol_2456
KEGG: dsy:DSY3826 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.949
Swol_0175
KEGG: dsy:DSY3360 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.784
Swol_1713
Multidrug resistance efflux pump-like protein; KEGG: dsy:DSY3826 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.722
Swol_1734
KEGG: sat:SYN_00202 hypothetical protein.
   
 
 0.721
Swol_1952
KEGG: mac:MA0870 ABC transporter, ATP-binding protein.
 
    
0.510
Swol_2229
KEGG: dsy:DSY0172 hypothetical protein.
  
 
 0.503
Swol_0179
KEGG: mta:Moth_2328 secretion protein HlyD.
 
 
 0.501
Swol_2446
KEGG: gme:Gmet_3464 secretion protein HlyD.
 
 
 0.474
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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