STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2470KEGG: mta:Moth_2418 hypothetical protein. (279 aa)    
Predicted Functional Partners:
murA-3
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.759
Swol_0249
KEGG: chy:CHY_0171 hypothetical protein.
 
 
 
 0.747
Swol_1133
KEGG: mta:Moth_1152 hypothetical protein.
  
     0.701
Swol_0915
Response regulator receiver protein; KEGG: mta:Moth_1106 hypothetical protein.
  
     0.659
Swol_1336
KEGG: mta:Moth_1325 hypothetical protein.
  
     0.638
Swol_1340
KEGG: mta:Moth_1327 protein of unknown function DUF1614.
  
     0.624
Swol_2471
KEGG: chy:CHY_0906 thioredoxin-disulfide reductase.
     
 0.610
Swol_0563
KEGG: chy:CHY_1995 hypothetical protein.
  
     0.602
Swol_1479
KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family.
  
 
 0.596
Swol_1337
Hypothetical protein.
  
     0.593
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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