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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2471KEGG: chy:CHY_0906 thioredoxin-disulfide reductase. (302 aa)    
Predicted Functional Partners:
Swol_0462
Thioredoxin; KEGG: sth:STH2404 thioredoxin; Belongs to the thioredoxin family.
 
 0.985
Swol_1300
KEGG: ctc:CTC02552 thioredoxin reductase.
  
  
 
0.920
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
     
 0.909
Swol_2182
KEGG: aae:aq_486 alkyl hydroperoxide reductase.
  
 
 0.835
Swol_2181
Peroxiredoxin-like protein; KEGG: gme:Gmet_2723 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 
 0.786
Swol_2054
KEGG: cpe:CPE1014 probable flavoprotein.
  
  
 0.682
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
 
  
 0.642
Swol_2472
Peptidase M23B; KEGG: mta:Moth_2422 peptidase M23B.
  
    0.618
murA-3
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
  
 0.610
Swol_2470
KEGG: mta:Moth_2418 hypothetical protein.
     
 0.610
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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