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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2474KEGG: mta:Moth_2069 PilT protein-like. (141 aa)    
Predicted Functional Partners:
Swol_2475
KEGG: mta:Moth_2070 transcriptional regulator, AbrB family.
       0.789
Swol_0131
KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor).
  
     0.745
Swol_0130
KEGG: mta:Moth_2364 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.717
Swol_0127
Hypothetical protein; KEGG: mta:Moth_1253 O-antigen polymerase.
  
     0.643
Swol_1458
KEGG: tte:TTE1036 hypothetical protein.
  
     0.630
Swol_1043
Hypothetical protein; KEGG: mta:Moth_1459 Ig-like, group 2.
  
     0.628
Swol_0145
Hypothetical protein; KEGG: mta:Moth_1397 DNA polymerase, beta-like region.
 
     0.591
Swol_0139
Hypothetical protein; KEGG: mta:Moth_2343 copper amine oxidase-like.
  
     0.529
Swol_1434
KEGG: mta:Moth_1703 hypothetical protein.
  
     0.525
Swol_0748
KEGG: mta:Moth_0181 hypothetical protein.
  
     0.520
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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