STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2484KEGG: pca:Pcar_2393 hypothetical protein. (246 aa)    
Predicted Functional Partners:
Swol_2455
KEGG: sat:SYN_00841 hypothetical cytosolic protein.
 
     0.744
Swol_2188
Hypothetical protein.
  
     0.722
Swol_2454
KEGG: sat:SYN_00842 uridylate kinase.
 
     0.701
Swol_1260
Hypothetical protein; KEGG: btk:BT9727_0789 possible S-layer protein.
  
     0.656
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
  
     0.654
Swol_2160
KEGG: cac:CAC2592 6-pyruvoyl-tetrahydropterin synthase related domain; conserved membrane protein.
  
     0.651
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.642
Swol_1721
Hypothetical protein; KEGG: ctc:CTC00761 membrane-associated protein.
  
     0.630
Swol_0165
FOG: WD40-like repeat protein; KEGG: mac:MA4287 cell surface protein.
  
     0.622
Swol_1672
KEGG: pca:Pcar_0150 hypothetical protein.
  
     0.621
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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