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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2493KEGG: mma:MM0156 type IIS restriction enzyme. (1183 aa)    
Predicted Functional Partners:
Swol_2494
KEGG: chy:CHY_2654 hypothetical protein.
 
  
 0.978
Swol_2496
KEGG: dsy:DSY0675 hypothetical protein.
 
  
 0.964
Swol_2495
KEGG: chy:CHY_2655 hypothetical protein.
 
    0.945
Swol_2488
KEGG: chy:CHY_2651 ATP-dependent Lon protease.
 
  
 0.943
Swol_0999
KEGG: mhu:Mhun_1906 ATP-dependent protease La.
 
  
 0.933
Swol_0990
KEGG: mma:MM0154 hypothetical protein.
 
  
 0.932
Swol_2489
KEGG: chy:CHY_2652 hypothetical protein.
 
     0.853
Swol_2072
KEGG: ddi:DDB0168508 hypothetical protein.
  
    0.790
Swol_0998
KEGG: eli:ELI_14750 hypothetical protein.
 
     0.661
Swol_1163
Conserved hypothetical protein; KEGG: sat:SYN_01419 putative tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase / fibronectin/fibrinogen-binding protein.
  
  
 0.630
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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