STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2527Hypothetical protein. (791 aa)    
Predicted Functional Partners:
Swol_2528
KEGG: vvy:VVA1541 hypothetical protein.
 
 
 0.988
Swol_2524
KEGG: vvy:VVA1536 hypothetical protein.
 
     0.963
Swol_2526
Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)-like protein.
 
  
 0.954
Swol_1753
KEGG: ser:SERP2458 CRISPR-associated protein, TM1808 family.
 
 
 0.889
Swol_1755
KEGG: stl:stu0961 hypothetical protein.
 
 
 0.884
Swol_1752
CRISPR-associated protein, Csm5 family; KEGG: mbo:Mb2843c hypothetical protein.
 
 
 0.866
Swol_2525
Hypothetical protein.
       0.844
Swol_1756
KEGG: ser:SERP2461 CRISPR-associated protein, TM1811 family.
 
 
 0.832
Swol_2529
Hypothetical protein.
       0.819
Swol_2530
Hypothetical protein.
       0.702
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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