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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2558KEGG: mta:Moth_1150 hypothetical protein. (366 aa)    
Predicted Functional Partners:
Swol_2557
KEGG: tte:TTE1991 activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain).
   
 0.969
Swol_2559
KEGG: mta:Moth_1151 hypothetical protein.
   
0.933
Swol_0632
KEGG: chy:CHY_1411 CoA-substrate-specific enzyme activase domain protein.
   
 0.836
Swol_2560
KEGG: chy:CHY_1802 selenocysteine-specific translation elongation factor.
       0.628
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
       0.627
Swol_2556
KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein).
       0.588
Swol_0452
KEGG: chy:CHY_0311 putative CoA-substrate-specific enzyme activase.
 
   
 0.575
Swol_0963
KEGG: tte:TTE1573 hypothetical protein.
  
     0.498
Swol_0411
KEGG: mta:Moth_1417 CoA enzyme activase.
   
 0.489
Swol_1396
KEGG: mta:Moth_1344 hypothetical protein.
  
     0.483
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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