close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2565KEGG: tte:TTE0841 membrane proteins related to metalloendopeptidase. (304 aa)    
Predicted Functional Partners:
Swol_2564
KEGG: tte:TTE0840 hypothetical protein.
 
   
 0.811
Swol_0862
CheC, inhibitor of MCP methylation; KEGG: dsy:DSY2981 hypothetical protein.
   
 
 0.695
Swol_1109
Peptidoglycan glycosyltransferase; KEGG: mta:Moth_1710 penicillin-binding protein 1A.
  
  
 0.621
Swol_0921
KEGG: gka:GK3406 penicillin-binding protein.
 
   
 0.616
Swol_1247
KEGG: chy:CHY_0674 putative cell-wall associated endopeptidase.
  
  
 0.518
Swol_1100
Soluble lytic murein transglycosylase and related regulatory protein; KEGG: oih:OB2138 lytic transglycosylase.
  
 0.509
Swol_2376
KEGG: bat:BAS5136 stage II sporulation protein D.
 
   
 0.462
Swol_0489
Peptidoglycan glycosyltransferase; KEGG: tte:TTE1258 cell division protein FtsI/penicillin-binding protein 2.
 
   
 0.420
Swol_2108
KEGG: mta:Moth_0087 sporulation protein and related proteins.
 
   
 0.417
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.