STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfum_0151Methyltransferase type 12; PFAM: glycosyl transferase, family 2; NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: gvi:gll2778 hypothetical protein. (491 aa)    
Predicted Functional Partners:
Sfum_0152
KEGG: mbu:Mbur_1617 hypothetical protein.
  
  
 0.837
Sfum_1870
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rba:RB12434 O-GlcNAc transferase.
 
     0.549
Sfum_0153
Hypothetical protein.
       0.540
Sfum_0146
PFAM: glycosyl transferase, family 2; KEGG: sat:SYN_00829 glycosyltransferase involved in cell wall biogenesis.
 
  
 0.483
Sfum_2243
PFAM: glycosyl transferase, family 2; KEGG: gsu:GSU2509 glycosyl transferase, group 2 family protein.
 
  
 0.471
Sfum_0127
KEGG: mta:Moth_2225 hypothetical protein.
 
  
 0.431
Sfum_3351
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nar:Saro_3232 hypothetical protein.
 
 
 0.415
Sfum_3354
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1505 ABC transporter, ATP-binding protein.
  
  
 0.405
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.