STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfum_0371PFAM: glycosyl transferase, family 9; KEGG: dar:Daro_0162 glycosyl transferase, family 9. (378 aa)    
Predicted Functional Partners:
Sfum_3193
PFAM: glycosyl transferase, family 9; KEGG: pca:Pcar_1263 ADP-heptose--LPS heptosyltransferase II, putative.
 
 
 0.986
Sfum_0373
PFAM: glycosyl transferase, group 1; KEGG: cvi:CV0817 probable glycosyltransferase.
 
 
 0.977
Sfum_0370
TIGRFAM: lipopolysaccharide heptosyltransferase III, putative; PFAM: glycosyl transferase, family 9; KEGG: dar:Daro_0152 lipopolysaccharide heptosyltransferase III, putative.
 
  
 
0.976
Sfum_0377
TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase, family 9; KEGG: pca:Pcar_1263 ADP-heptose--LPS heptosyltransferase II, putative.
 
 
0.967
nuoBCD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 20 kDa subunit family. In the C-terminal section; belongs to the complex I 49 kDa s [...]
    
 
 0.964
Sfum_0375
TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase, family 9; KEGG: pca:Pcar_1264 heptosyltransferase family protein.
 
  
 
0.947
Sfum_2474
Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
 
  
 0.947
Sfum_3752
Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
 
  
 0.946
Sfum_2239
PFAM: glycosyl transferase, family 9; KEGG: mag:amb0528 ADP-heptose.
 
  
 0.871
Sfum_3634
PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1.
 
  
 0.809
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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