STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfum_0444KEGG: dps:DP3001 hypothetical protein. (334 aa)    
Predicted Functional Partners:
Sfum_2398
Respiratory nitrite reductase (cytochrome; PFAM: cytochrome c552; KEGG: gme:Gmet_0294 cytochrome c552; Belongs to the cytochrome c-552 family.
  
 
 0.886
Sfum_1960
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: ppr:PBPRB0648 putative ferredoxin-type protein.
  
 
 0.755
Sfum_1329
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sat:SYN_02058 4Fe-4S binding protein.
  
 
 0.742
Sfum_0445
PFAM: Cytochrome b/b6, N-terminal domain; KEGG: ade:Adeh_2404 cytochrome b/b6-like.
     
 0.732
Sfum_0610
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dvu:DVU0694 molybdopterin oxidoreductase, molybdopterin-binding subunit, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.693
Sfum_1003
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: afu:AF1203 molybdopterin oxidoreductase, molybdopterin binding subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.693
Sfum_1318
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dvu:DVU0173 thiosulfate reductase, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.693
Sfum_3195
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: dvu:DVU1611 molybdopterin oxidoreductase domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.693
Sfum_3287
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dvu:DVU0173 thiosulfate reductase, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.693
Sfum_1840
Hypothetical protein.
  
 
 0.629
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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