STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfum_1299PFAM: AMMECR1 domain protein; KEGG: sat:SYN_00073 hypothetical cytosolic protein. (187 aa)    
Predicted Functional Partners:
Sfum_1298
PFAM: protein of unknown function DUF52; KEGG: sat:SYN_00074 hypothetical cytosolic protein; Belongs to the MEMO1 family.
    0.995
Sfum_0354
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gsu:GSU1728 pyruvate-formate lyase-activating enzyme.
     0.878
Sfum_1995
PFAM: Radical SAM domain protein; KEGG: pab:PAB1859 pyruvate formate-lyase activating enzyme related protein (act-like).
     0.878
Sfum_4016
PFAM: Radical SAM domain protein; KEGG: pai:PAE2451 pyruvate formate-lyase activating enzyme homolog.
 
     0.703
Sfum_0075
PFAM: protein of unknown function DUF52; KEGG: aae:aq_1336 hypothetical protein.
 
    0.540
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
  
 0.488
Sfum_1300
Hypothetical protein.
       0.478
Sfum_1996
PFAM: AMMECR1 domain protein; protein of unknown function DUF52; KEGG: sat:SYN_00074 hypothetical cytosolic protein; Belongs to the MEMO1 family.
 
   
0.460
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.