STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfum_1794PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dps:DP1010 related to heterodisulfide reductase, subunit A. (576 aa)    
Predicted Functional Partners:
Sfum_2148
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: gsu:GSU0089 heterodisulfide reductase subunit.
 
 0.963
Sfum_1973
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: chy:CHY_0931 hydrogenase, methyl-violgen-reducing type, delta subunit, selenocysteine-containing.
 
 0.953
Sfum_0823
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: mst:Msp_0314 MvhD1.
 
 0.946
Sfum_3535
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: dps:DP1011 methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.943
Sfum_2154
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: mta:Moth_1193 methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.940
Sfum_1793
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: mst:Msp_0314 MvhD1.
 
 0.931
Sfum_2972
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: gsu:GSU0089 heterodisulfide reductase subunit.
 
 0.910
Sfum_3014
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: gsu:GSU0089 heterodisulfide reductase subunit.
 
 0.910
Sfum_1286
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase, delta subunit; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cte:CT0867 heterodisulfide reductase, subunit A/hydrogenase, delta subunit, putative.
 
 
0.890
Sfum_1050
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase, delta subunit; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: afu:AF0662 heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta.
 
 
0.888
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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