STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfum_1971PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_0933 putative anaerobic sulfite reductase, A subunit. (350 aa)    
Predicted Functional Partners:
Sfum_1970
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dde:Dde_3530 hydrogenase, putative.
 
 0.999
Sfum_1318
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dvu:DVU0173 thiosulfate reductase, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.914
Sfum_3287
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dvu:DVU0173 thiosulfate reductase, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.914
Sfum_4042
TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; KEGG: dde:Dde_0526 sulfite reductase, dissimilatory-type alpha subunit.
  
 
 0.910
Sfum_4043
TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: dps:DP0798 probable dissimilatory sulfite reductase, beta subunit (DsrB).
  
 
 0.910
Sfum_2681
TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: sth:STH1137 cysteine synthase.
    
 0.904
Sfum_1972
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_0932 putative dehydrogenase, beta subunit.
 
   
 0.901
Sfum_0390
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: dvu:DVU3033 iron-sulfur cluster-binding protein.
  
 
 0.754
Sfum_1973
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: chy:CHY_0931 hydrogenase, methyl-violgen-reducing type, delta subunit, selenocysteine-containing.
 
   
 0.751
Sfum_2147
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dvu:DVU2401 hydrogenase, iron-sulfur cluster-binding subunit, putative.
 
     0.636
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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