Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sfum_3208PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dvu:DVU1358 hydrolase, haloacid dehalogenase-like family. (227 aa)    
Predicted Functional Partners:
Sfum_3382
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cte:CT0889 phosphoglycolate phosphatase.
  
  
 0.942
Sfum_0392
PFAM: FAD linked oxidase domain protein; KEGG: dde:Dde_3239 glycolate oxidase, subunit GlcD.
    
 0.910
Sfum_0534
PFAM: FAD linked oxidase domain protein; KEGG: gsu:GSU3296 glycolate oxidase subunit GlcD, putative.
    
 0.910
Sfum_3899
PFAM: FAD linked oxidase domain protein; KEGG: dvu:DVU0390 glycolate oxidase, subunit GlcD, putative.
    
 0.910
Sfum_3914
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: mta:Moth_1954 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
    
 0.904
Sfum_0393
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: dvu:DVU3028 iron-sulfur cluster-binding protein.
    
 0.902
Sfum_0604
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dps:DP0805 similar to beta-phosphoglucomutase.
     
  0.900
Sfum_3209
KEGG: sco:SCO1662 hypothetical protein.
       0.735
Sfum_3207
PFAM: aminotransferase, class IV; KEGG: bba:Bd1736 branched-chain amino acid aminotransferase.
 
  
 0.592
Sfum_3210
Hypothetical protein.
       0.563
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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