STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfum_3498PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dvu:DVU1939 anaerobic glycerol-3-phosphate dehydrogenase, B subunit, putative. (432 aa)    
Predicted Functional Partners:
Sfum_3499
PFAM: FAD dependent oxidoreductase; KEGG: dvu:DVU1940 anaerobic glycerol-3-phosphate dehydrogenase, A subunit, putative; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 0.999
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: gme:Gmet_0008 NAD-dependent glycerol-3-phosphate dehydrogenase-like; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
  0.900
Sfum_3097
PFAM: phospholipid/glycerol acyltransferase; KEGG: mxa:MXAN_3288 acyltransferase; Belongs to the GPAT/DAPAT family.
     
  0.900
Sfum_0871
PFAM: phospholipid/glycerol acyltransferase; KEGG: lpn:lpg0551 1-acyl-sn-glycerol-3-phosphate acetyltransferase.
     
  0.800
Sfum_0937
KEGG: sru:SRU_2301 1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; PFAM: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
  0.800
Sfum_1596
KEGG: pca:Pcar_0644 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; PFAM: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
  0.800
Sfum_0868
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dvu:DVU0176 glycerophosphoryl diester phosphodiesterase family protein.
 
 
 0.768
Sfum_0393
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: dvu:DVU3028 iron-sulfur cluster-binding protein.
  
 0.674
Sfum_0079
PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: rxy:Rxyl_2995 protein of unknown function DUF224, cysteine-rich region.
 
  
 0.600
Sfum_3497
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1452 probable permease component of ABC transporter.
       0.596
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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