STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfum_3869PFAM: protein of unknown function DUF72; KEGG: sru:SRU_1065 hypothetical protein. (343 aa)    
Predicted Functional Partners:
Sfum_2964
Hypothetical protein; KEGG: sat:SYN_00932 coA pyrophosphatase.
 
     0.632
Sfum_2783
KEGG: dps:DP0006 hypothetical protein.
 
     0.583
Sfum_2418
KEGG: mxa:MXAN_3111 hypothetical protein.
  
     0.552
Sfum_1631
KEGG: noc:Noc_1209 hypothetical protein.
 
     0.497
Sfum_4081
KEGG: sat:SYN_01616 hypothetical protein.
  
     0.474
Sfum_3771
KEGG: sat:SYN_02864 hypothetical cytosolic protein.
  
     0.473
Sfum_2469
KEGG: sat:SYN_00898 hypothetical cytosolic protein.
  
     0.462
Sfum_0684
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mth:MTH83 O-linked GlcNAc transferase.
  
     0.459
Sfum_2530
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: sat:SYN_02030 colligrin; Belongs to the CinA family.
 
    0.437
Sfum_1752
KEGG: cya:CYA_2879 hypothetical protein.
  
     0.426
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.