STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_02090Hypothetical protein. (342 aa)    
Predicted Functional Partners:
S23_36130
DNA polymerase III subunit delta'.
 
 
 0.993
dnaN
DNA polymerase III subunit beta.
 
 
 0.992
S23_41530
Hypothetical protein.
  
 
 0.991
S23_66450
DNA polymerase III subunits gamma and tau.
 
 
 0.990
dnaE
DNA polymerase III subunit alpha.
  
 0.982
dnaQ
DNA polymerase III epsilon chain.
    
 0.968
dnaE-2
Error-prone DNA polymerase.
  
 0.956
S23_02100
Hypothetical protein.
 
    0.842
ssb
Single-strand DNA binding protein RecBCD nuclease.
    
 0.834
alr
Replicative DNA helicase.
 
 
 0.832
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.