Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S23_02450Probable 2-dehydropantoate 2-reductase. (307 aa)    
Predicted Functional Partners:
panC
Pantothenate synthetase.
    
 0.945
S23_06960
2-dehydropantoate 2-reductase.
  
  
 
0.705
S23_48540
2-dehydropantoate 2-reductase.
  
  
 
0.701
alkB
Alkylated DNA repair protein.
   
    0.669
S23_06670
2-dehydropantoate 2-reductase.
  
  
 
0.639
S23_21730
Hypothetical protein.
   
    0.529
S23_65510
Mandelate racemase/muconate lactonizing protein.
   
    0.529
S23_02460
Hypothetical protein.
       0.519
ribA
3,4-dihydroxy-2-butanone-4-phoshate synthase/GTP cyclohydrolase II.
   
  
 0.416
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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