STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cahCarbonate dehydratase. (214 aa)    
Predicted Functional Partners:
cynS
Cyanate hydratase.
  
 
 0.959
S23_26730
Hypothetical protein.
    
 0.951
cbbS
Ribulose bisphosphate carboxylase small chain.
    
 0.925
S23_33250
Putative carbonic anhydrase.
  
  
 
0.916
cah-2
Probable carbonic anhydrase.
     
 0.911
S23_51950
Formate/nitrite family of transporters.
  
  
 0.875
S23_60260
Sulfate transporter.
 
 
 0.754
gpt
Xanthine-guanine phosphoribosyltransferase.
   
    0.690
apt
Adenine phosphoribosyltransferase.
   
    0.690
citE
Citrate lyase beta subunit.
       0.596
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.