STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
leuD3-isopropylmalate dehydratase small subunit. (201 aa)    
Predicted Functional Partners:
leuC
3-isopropylmalate dehydratase large subunit 2.
 0.999
leuB
3-isopropylmalate dehydrogenase.
 
 
 0.996
leuA
2-isopropylmalate synthase.
 
 
 0.995
S23_52130
3-isopropylmalate dehydrogenase.
 
 
 0.993
S23_52590
3-isopropylmalate dehydrogenase.
 
 
 0.991
S23_44560
2-isopropylmalate synthase.
 
 
 0.985
S23_45990
Putative homocitrate synthase.
 
 
 0.971
ilvH
Acetolactate synthase 3 regulatory subunit.
 
 
 0.954
S23_17580
Tartrate dehydrogenase/decarboxylase.
 
 
 0.951
S23_50990
Tartrate dehydrogenase.
 
 
 0.948
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.