STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_03490Putative DNA-binding protein. (270 aa)    
Predicted Functional Partners:
moeB
Molybdopterin biosynthesis protein.
   
 
 0.651
cysD-2
Sulfate adenylyltransferase subunit 2.
    
  0.644
cysH
Phosphoadenosine phosphosulfate reductase.
    
  0.644
S23_39840
Putative NAD-dependent epimerase/dehydratase.
 
  
  0.614
S23_03480
Hypothetical protein.
       0.553
nadE
Glutamine-dependent NAD(+) synthetase.
    
 0.485
nadE-2
NAD synthetase.
    
 0.485
S23_42350
Hypothetical protein.
  
     0.430
leuD
3-isopropylmalate dehydratase small subunit.
       0.420
S23_60340
Acetyltransferase.
  
  
  0.404
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.