STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_04400Hypothetical protein. (231 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase large subunit.
    
 0.781
pdhB
Pyruvate dehydrogenase subunit beta.
   
 0.760
S23_53770
Putative sensor histidine kinase with a GAF domain and multiple HAMP and response regulator receiver domains.
   
 0.737
S23_63040
Putative adenylate cyclase.
   
 0.735
aqpZ
Aquaporin Z.
   
 0.662
S23_51960
Putative serine/threonine protein kinase.
  
 0.645
S23_25740
Hypothetical protein.
    
 0.636
S23_28700
RNA polymerase beta subunit.
    
 
 0.625
rpoC
DNA-directed RNA polymerase subunit beta'.
    
 
 0.615
rpoA
DNA-directed RNA polymerase subunit alpha.
    
   0.614
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.