STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_06970Putative enoyl-CoA hydratase. (267 aa)    
Predicted Functional Partners:
hmgL
hydroxymethylglutaryl-CoA lyase.
 
 
 0.957
mccB
3-methylcrotonyl-CoA carboxylase beta subunit.
 
 
  0.946
mccA
3-methylcrotonyl-CoA carboxylase alpha subunit.
  
 0.914
S23_53770
Putative sensor histidine kinase with a GAF domain and multiple HAMP and response regulator receiver domains.
   
 0.869
S23_47550
Two-component hybrid sensor and regulator.
    
 0.806
rpsO
30S ribosomal protein S15.
    
 0.791
rpsP
30S ribosomal protein S16.
    
  0.790
rpsE
30S ribosomal protein S5.
    
  0.790
rpsI
30S ribosomal protein S9.
    
  0.790
S23_33270
30S ribosomal protein S2.
    
 0.789
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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