STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mppMitochondrial processing peptidase-like protein. (429 aa)    
Predicted Functional Partners:
fbcH
Cytochrome b/c1 precursor.
   
 0.997
S23_57170
Probable NADH-ubiquinone oxidoreductase chain F.
   
 0.986
atpA
ATP synthase subunit alpha.
  
 0.974
atpG
ATP synthase gamma chain.
  
 0.965
S23_20720
Rieske iron-sulfur protein.
   
 0.958
fbcF
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
   
 0.958
atpH
ATP synthase subunit delta.
  
 0.955
atpC
ATP synthase epsilon chain.
   
 0.943
S23_04030
ATP synthase beta chain.
  
 0.925
nuoF
NADP ubiquinone oxidoreductase chain F.
   
 0.909
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.