STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimJRibosomal-protein-alanine N-acetyltransferase. (195 aa)    
Predicted Functional Partners:
rnc
RNase III.
   
    0.749
thrC
Threonine synthase.
       0.694
mpp
Mitochondrial processing peptidase-like protein.
  
    0.694
S23_66250
Putative sensor histidine kinase.
  
     0.576
S23_08040
Hypothetical protein.
       0.571
gltB
Glutamate synthase large subunit.
   
 
 0.559
S23_65370
Hypothetical protein.
  
     0.549
murB
UDP-N-acetylenolpyruvoylglucosamine reductase.
  
    0.548
manC
GDP-mannose 1-phosphate guanylyltransferase.
    
  0.540
manC-2
GDP-mannose 1-phosphate guanylyltransferase.
    
  0.540
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.