STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_14920Short-chain dehydrogenase/reductase SDR. (262 aa)    
Predicted Functional Partners:
S23_56370
Polyketide/non-ribosomal peptide synthetase.
  
 0.923
S23_62670
Hypothetical protein.
  
 
 0.907
S23_62680
Amino acid adenylation domain-containing protein.
   
 0.862
S23_56360
Amino acid adenylation domain protein.
    
 0.854
S23_57820
Hypothetical protein.
    
 0.846
S23_62880
Amino acid adenylation domain protein.
    
 0.838
polA
DNA polymerase I.
   
 
 0.821
S23_62690
Amino acid adenylation domain-containing protein.
   
 0.819
S23_31980
Putative short-chain dehydrogenase.
  
 
  0.803
S23_14930
Putative hydrolase.
       0.798
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.