STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S23_16640ABC transporter permease protein. (431 aa)    
Predicted Functional Partners:
S23_16630
ABC transporter permease protein.
0.998
S23_16660
ABC transporter ATP-binding protein.
 
 0.997
S23_59230
ABC transporter permease.
 0.973
S23_47210
ABC transporter permease protein.
 0.972
S23_11360
ABC transporter permease protein.
 0.971
S23_12240
ABC transporter permease protein.
 0.969
S23_14490
ABC transporter permease protein.
 0.969
S23_16650
ABC transporter substrate-binding protein.
 
 
 0.962
S23_14440
ABC transporter ATP-binding protein.
 
 0.956
S23_12220
ABC transporter ATP-binding protein.
 
 0.955
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.