STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_19710Hypothetical protein. (234 aa)    
Predicted Functional Partners:
S23_56360
Amino acid adenylation domain protein.
  
 0.792
S23_57820
Hypothetical protein.
   
 0.761
pdhB
Pyruvate dehydrogenase subunit beta.
   
 0.725
S23_39840
Putative NAD-dependent epimerase/dehydratase.
  
  
  0.725
S23_62670
Hypothetical protein.
   
 0.695
ooxA
Opine oxidase subunit A.
    
 0.608
sucA
Alpha-ketoglutarate decarboxylase.
    
  0.567
S23_25010
Hypothetical protein.
  
     0.554
rpsJ
30S ribosomal protein S10.
    
  0.544
S23_33270
30S ribosomal protein S2.
   
  0.532
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.