STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_19740Putative Isochorismatase family protein. (216 aa)    
Predicted Functional Partners:
S23_19760
Hypothetical protein.
 
     0.936
S23_19750
Hypothetical protein.
 
    0.913
S23_19790
Hypothetical protein.
 
     0.869
S23_19770
Putative membrane protein of unknown function.
 
     0.866
S23_19800
Hypothetical protein.
 
     0.766
S23_19780
Hypothetical protein.
  
    0.750
S23_30400
Putative transcriptional regulatory protein XRE family.
   
    0.737
otsA
Trehalose-6-phosphate synthetase.
   
    0.728
osmC
Osmotically inducible protein.
   
    0.714
wrbA
Flavoprotein WrbA.
   
    0.693
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.