STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_31230Hypothetical protein. (307 aa)    
Predicted Functional Partners:
dme
NAD-dependent malic enzyme.
  
  
 0.813
S23_31240
Putative Holliday junction resolvase.
       0.809
S23_18640
Malate dehydrogenase.
  
  
 0.768
S23_31250
Hypothetical protein.
       0.569
S23_59910
Hypothetical protein.
  
     0.461
S23_08190
Two-component hybrid sensor and regulator.
 
   
 0.436
S23_59570
Hypothetical protein.
 
 
 0.431
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.