STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S23_32020Hypothetical protein. (159 aa)    
Predicted Functional Partners:
rpoD
Sigma 70.
  
 
   0.806
S23_28700
RNA polymerase beta subunit.
    
   0.749
rpoC
DNA-directed RNA polymerase subunit beta'.
    
   0.749
rpoA
DNA-directed RNA polymerase subunit alpha.
  
 
   0.713
S23_31450
DNA-directed RNA polymerase subunit omega.
  
 
   0.709
rpoH
Sigma 32.
  
 
 
 0.682
gst
Adenine DNA methyltransferase.
  
   
 0.677
S23_40050
Putative NADH-ubiquinone oxidoreductase subunit.
  
     0.657
dnaJ-2
DnaJ family molecular chaperone.
  
     0.640
rpoH3
RNA polymerase subunit.
    
 
 0.630
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.