STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_36610Putative proline dipeptidase. (390 aa)    
Predicted Functional Partners:
purB
Adenylosuccinate lyase.
  
 
  0.816
S23_36620
Hypothetical protein.
  
    0.799
pcaB
3-carboxy-cis,cis-muconate cycloisomerase.
    
  0.792
pcaB-2
3-carboxy-cis,cis-muconate cycloisomerase.
    
  0.792
guaB
Inosine-5`-monophosphate dehydrogenase.
   
   0.722
S23_52970
Putative peptidase.
 
 
 0.717
S23_12640
Cation-transporting ATPase.
   
 0.703
S23_44310
Putative cation-transporting ATPase.
   
 0.703
pepT
Peptidase T.
  
 
 0.670
gcvT
Glycine cleavage system aminomethyltransferase T.
  
 0.654
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.