STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_36610Putative proline dipeptidase. (390 aa)    
Predicted Functional Partners:
S23_36620
Hypothetical protein.
       0.793
S23_63740
Putative L-proline 4-hydroxylase.
    
 0.762
S23_07230
Hypothetical protein.
    
  0.705
S23_15550
Bifunctional transaldolase/phosoglucose isomerase.
  
 
 0.635
S23_29010
Adenylate kinase.
   
 
 0.634
gcvT
Glycine cleavage system aminomethyltransferase T.
  
 0.632
guaB
Inosine-5`-monophosphate dehydrogenase.
   
   0.632
S23_36600
Putative regulatory protein.
       0.619
S23_29730
Hypothetical protein.
    
 0.601
S23_52970
Putative peptidase.
 
 
 0.596
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.