Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S23_36670Hypothetical protein. (252 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase large subunit.
    
 0.890
S23_15550
Bifunctional transaldolase/phosoglucose isomerase.
  
 
 0.849
guaA-2
GMP synthase [glutamine-hydrolyzing].
    
 0.800
guaB
Inosine-5`-monophosphate dehydrogenase.
  
 
 0.795
S23_17730
Hypothetical protein.
  
    0.763
S23_25290
Hypothetical protein.
  
    0.763
S23_10660
Hypothetical protein.
  
    0.753
S23_56010
Hypothetical protein.
  
    0.753
S23_52380
Hypothetical protein.
 
   
 0.748
S23_15700
Putative ferredoxin oxidoreductase alpha subunit.
 
  
  0.730
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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