STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_36680Hypothetical protein. (250 aa)    
Predicted Functional Partners:
fbcH
Cytochrome b/c1 precursor.
  
 0.993
S23_57170
Probable NADH-ubiquinone oxidoreductase chain F.
   
 
 0.920
S23_20720
Rieske iron-sulfur protein.
  
 0.903
fbcF
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
  
 0.903
S23_13190
Formate dehydrogenase iron-sulfur subunit.
   
 0.810
nuoD
NADP ubiquinone oxidoreductase chain D.
   
 
 0.802
fixN
Cytochrome-c oxidase.
   
 0.792
fixO
Cytochrome-c oxidase.
  
 0.787
cyoB
Cytochrome O ubiquinol oxidase subunit I.
  
 0.759
coxA
Cytochrome C oxidase subunit I.
  
 0.759
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.