STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_43390ABC transporter ATP-binding protein. (239 aa)    
Predicted Functional Partners:
S23_43410
Inner-membrane translocator.
 
 
  0.971
S23_43420
Amino acid ABC transporter permease protein.
 
 
  0.961
S23_18060
Putative ABC transporter permiase component.
 
 
 0.949
S23_13740
ABC transporter permease protein.
 
 
 0.928
S23_09620
ABC transporter permease protein.
 
  0.924
S23_18880
ABC transporter permease protein.
 
 
  0.922
S23_08530
ABC transporter permease protein.
 
  0.907
S23_43400
ABC transporter ATP-binding protein.
 
 
 
0.907
S23_22790
ABC transporter permease protein.
 
  0.880
S23_25520
Inner-membrane translocator.
 
 
  0.873
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.