STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S23_51170Putative zinc binding dehydrogenase. (334 aa)    
Predicted Functional Partners:
S23_56370
Polyketide/non-ribosomal peptide synthetase.
  
 0.940
S23_62670
Hypothetical protein.
  
 0.883
S23_56360
Amino acid adenylation domain protein.
   
 0.834
S23_57820
Hypothetical protein.
   
 0.804
S23_62680
Amino acid adenylation domain-containing protein.
   
 0.789
S23_09230
Hypothetical protein.
 
  
  0.650
S23_61840
Alcohol dehydrogenase.
 
  
  0.646
S23_62880
Amino acid adenylation domain protein.
   
 0.634
S23_62930
Putative phosphopantetheinyl transferase.
    
  0.633
S23_62690
Amino acid adenylation domain-containing protein.
   
 0.594
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.