STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH38888.1Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. (536 aa)    
Predicted Functional Partners:
SDI04784.1
Sarcosine oxidase subunit alpha.
  
 0.790
SDI04843.1
Sarcosine oxidase subunit beta.
  
 
  0.711
SDI04976.1
Creatinine amidohydrolase.
    
  0.694
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.675
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
  0.645
gcvT-2
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
  0.645
SDH41800.1
IMP dehydrogenase.
 
 
   0.638
SDH38814.1
Hypothetical protein.
 
     0.635
SDI90940.1
Membrane alanyl aminopeptidase Metallo peptidase. MEROPS family M01.
 
 
 0.614
SDH94799.1
Glycine/D-amino acid oxidase.
  
 
  0.609
Your Current Organism:
Arthrobacter subterraneus
NCBI taxonomy Id: 335973
Other names: A. subterraneus, Arthrobacter subterraneus Chang et al. 2008, DSM 17585, KCTC 9997, strain CH7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.