STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH37695.1DNA polymerase-3 subunit epsilon. (238 aa)    
Predicted Functional Partners:
SDI22845.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
 0.985
SDI31663.1
DNA polymerase III, alpha subunit.
    
 0.976
SDI11498.1
DNA polymerase-3 subunit gamma/tau.
   
 0.975
SDI42411.1
DNA polymerase-3 subunit delta'.
   
 0.975
SDH73462.1
DNA polymerase III, delta subunit.
    
 0.961
dnaE2
Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
    
 0.928
SDH84414.1
DNA polymerase-3 subunit epsilon.
 
  
 0.921
SDH37484.1
ATP-dependent DNA helicase, Rep family.
  
 0.832
SDH37629.1
Superfamily I DNA or RNA helicase.
  
 
 0.832
rpmD
LSU ribosomal protein L30P.
   
  0.663
Your Current Organism:
Arthrobacter subterraneus
NCBI taxonomy Id: 335973
Other names: A. subterraneus, Arthrobacter subterraneus Chang et al. 2008, DSM 17585, KCTC 9997, strain CH7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.