STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH95374.1Protein of unknown function DUF58. (393 aa)    
Predicted Functional Partners:
SDH95346.1
Transglutaminase-like superfamily protein.
 
    0.966
SDH95186.1
Hypothetical protein.
 
     0.894
SDH95246.1
Hypothetical protein.
 
     0.886
SDH95218.1
Serine/threonine protein kinase.
 
     0.877
SDH95314.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.873
SDH95465.1
Fibronectin type III domain-containing protein.
 
     0.873
SDH95438.1
Fibronectin type III domain-containing protein.
 
     0.848
SDH95157.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
 
     0.799
SDH95408.1
MoxR-like ATPase.
 
  
 0.799
SDH95283.1
Protein phosphatase.
 
     0.660
Your Current Organism:
Arthrobacter subterraneus
NCBI taxonomy Id: 335973
Other names: A. subterraneus, Arthrobacter subterraneus Chang et al. 2008, DSM 17585, KCTC 9997, strain CH7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.