node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI05792.1 | SDI05819.1 | SAMN04488693_105197 | SAMN04488693_105198 | Predicted arabinose efflux permease, MFS family. | Protein of unknown function. | 0.706 |
SDI05792.1 | SDI05844.1 | SAMN04488693_105197 | SAMN04488693_105199 | Predicted arabinose efflux permease, MFS family. | Cold-shock DNA-binding protein family. | 0.706 |
SDI05819.1 | SDI05792.1 | SAMN04488693_105198 | SAMN04488693_105197 | Protein of unknown function. | Predicted arabinose efflux permease, MFS family. | 0.706 |
SDI05819.1 | SDI05844.1 | SAMN04488693_105198 | SAMN04488693_105199 | Protein of unknown function. | Cold-shock DNA-binding protein family. | 0.879 |
SDI05844.1 | SDI05792.1 | SAMN04488693_105199 | SAMN04488693_105197 | Cold-shock DNA-binding protein family. | Predicted arabinose efflux permease, MFS family. | 0.706 |
SDI05844.1 | SDI05819.1 | SAMN04488693_105199 | SAMN04488693_105198 | Cold-shock DNA-binding protein family. | Protein of unknown function. | 0.879 |
SDI05844.1 | SDI80271.1 | SAMN04488693_105199 | SAMN04488693_12418 | Cold-shock DNA-binding protein family. | Prephenate dehydrogenase. | 0.658 |
SDI05844.1 | rplO | SAMN04488693_105199 | SAMN04488693_101260 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.585 |
SDI05844.1 | rplV | SAMN04488693_105199 | SAMN04488693_101273 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.687 |
SDI05844.1 | rplW | SAMN04488693_105199 | SAMN04488693_101276 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.606 |
SDI05844.1 | rpmD | SAMN04488693_105199 | SAMN04488693_101261 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L30P. | 0.602 |
SDI05844.1 | rpsL | SAMN04488693_105199 | SAMN04488693_101284 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.610 |
SDI05844.1 | rpsO | SAMN04488693_105199 | SAMN04488693_10468 | Cold-shock DNA-binding protein family. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.642 |
SDI05844.1 | rpsQ | SAMN04488693_105199 | SAMN04488693_101269 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.579 |
SDI80271.1 | SDI05844.1 | SAMN04488693_12418 | SAMN04488693_105199 | Prephenate dehydrogenase. | Cold-shock DNA-binding protein family. | 0.658 |
rplO | SDI05844.1 | SAMN04488693_101260 | SAMN04488693_105199 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | Cold-shock DNA-binding protein family. | 0.585 |
rplO | rplV | SAMN04488693_101260 | SAMN04488693_101273 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rplO | rplW | SAMN04488693_101260 | SAMN04488693_101276 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rplO | rpmD | SAMN04488693_101260 | SAMN04488693_101261 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | LSU ribosomal protein L30P. | 0.999 |
rplO | rpsL | SAMN04488693_101260 | SAMN04488693_101284 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |