Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH51666.1 | SDH73586.1 | SAMN04488693_101450 | SAMN04488693_102252 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | L-proline dehydrogenase. | 0.939 |
SDH51666.1 | SDH96161.1 | SAMN04488693_101450 | SAMN04488693_104204 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Assimilatory nitrate reductase (NADH) beta subunit. | 0.826 |
SDH51666.1 | SDH96354.1 | SAMN04488693_101450 | SAMN04488693_104210 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.826 |
SDH51666.1 | SDI00896.1 | SAMN04488693_101450 | SAMN04488693_10550 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Reductase C-terminal. | 0.826 |
SDH51666.1 | SDI11384.1 | SAMN04488693_101450 | SAMN04488693_10660 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Ferredoxin-NADP reductase. | 0.834 |
SDH51666.1 | SDI14451.1 | SAMN04488693_101450 | SAMN04488693_106151 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Nitric oxide dioxygenase; Belongs to the globin family. | 0.803 |
SDH51666.1 | SDI14477.1 | SAMN04488693_101450 | SAMN04488693_106152 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Transcriptional regulator, BadM/Rrf2 family. | 0.451 |
SDH51666.1 | SDI46983.1 | SAMN04488693_101450 | SAMN04488693_11231 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.498 |
SDH73586.1 | SDH51666.1 | SAMN04488693_102252 | SAMN04488693_101450 | L-proline dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.939 |
SDH73586.1 | SDI11384.1 | SAMN04488693_102252 | SAMN04488693_10660 | L-proline dehydrogenase. | Ferredoxin-NADP reductase. | 0.939 |
SDH73586.1 | SDI14451.1 | SAMN04488693_102252 | SAMN04488693_106151 | L-proline dehydrogenase. | Nitric oxide dioxygenase; Belongs to the globin family. | 0.796 |
SDH73586.1 | SDI46983.1 | SAMN04488693_102252 | SAMN04488693_11231 | L-proline dehydrogenase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.406 |
SDH73586.1 | argG | SAMN04488693_102252 | SAMN04488693_10412 | L-proline dehydrogenase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.465 |
SDH96161.1 | SDH51666.1 | SAMN04488693_104204 | SAMN04488693_101450 | Assimilatory nitrate reductase (NADH) beta subunit. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.826 |
SDH96161.1 | SDH96354.1 | SAMN04488693_104204 | SAMN04488693_104210 | Assimilatory nitrate reductase (NADH) beta subunit. | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.936 |
SDH96161.1 | SDI11384.1 | SAMN04488693_104204 | SAMN04488693_10660 | Assimilatory nitrate reductase (NADH) beta subunit. | Ferredoxin-NADP reductase. | 0.846 |
SDH96161.1 | SDI14451.1 | SAMN04488693_104204 | SAMN04488693_106151 | Assimilatory nitrate reductase (NADH) beta subunit. | Nitric oxide dioxygenase; Belongs to the globin family. | 0.858 |
SDH96354.1 | SDH51666.1 | SAMN04488693_104210 | SAMN04488693_101450 | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.826 |
SDH96354.1 | SDH96161.1 | SAMN04488693_104210 | SAMN04488693_104204 | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Assimilatory nitrate reductase (NADH) beta subunit. | 0.936 |
SDH96354.1 | SDI00896.1 | SAMN04488693_104210 | SAMN04488693_10550 | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Reductase C-terminal. | 0.772 |
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