STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI19807.1Conserved domain-containing protein. (263 aa)    
Predicted Functional Partners:
SDI19846.1
Aspartate racemase.
       0.517
SDI19880.1
Phosphotransferase enzyme family protein.
       0.517
SDI01587.1
Spore photoproduct lyase family protein.
  
     0.482
SDH40415.1
Osmoprotectant transport system substrate-binding protein.
  
    0.437
SDI57686.1
Osmoprotectant transport system substrate-binding protein.
  
    0.437
SDH58072.1
PRC-barrel domain-containing protein.
  
  
 
0.427
SDI68538.1
Hypothetical protein.
 
     0.426
Your Current Organism:
Arthrobacter subterraneus
NCBI taxonomy Id: 335973
Other names: A. subterraneus, Arthrobacter subterraneus Chang et al. 2008, DSM 17585, KCTC 9997, strain CH7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.