STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI44182.1Amino acid ABC transporter ATP-binding protein, PAAT family. (269 aa)    
Predicted Functional Partners:
SDI44212.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  0.999
SDI44243.1
Polar amino acid transport system permease protein.
  0.999
SDI44273.1
Polar amino acid transport system substrate-binding protein.
 
 0.992
SDH39523.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.984
SDH39496.1
Glutamate transport system permease protein.
 
 0.982
SDH96565.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.964
SDH50235.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.940
SDH39462.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.928
SDH50200.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.915
SDH96528.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.884
Your Current Organism:
Arthrobacter subterraneus
NCBI taxonomy Id: 335973
Other names: A. subterraneus, Arthrobacter subterraneus Chang et al. 2008, DSM 17585, KCTC 9997, strain CH7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.